sourmash-bio/sourmash

Bring in CWL description from luizirber/sourmash-cwl

Open

#515 opened on Jul 18, 2018

View on GitHubContributor guide
 (0 comments) (0 reactions) (0 assignees)Python (94 forks)github user discovery
help wanted

Repository metrics

Stars
 (555 stars)
PR merge metrics
 (Avg merge 4h 7m) (8 merged PRs in 30d)

Description

During BOSC I wrote the CWL tool description for sourmash compute: https://github.com/luizirber/sourmash-cwl

For testing purposes I put it in another repo, but it makes more sense to have them here.

Contributor guide

Research direction
Examine the CWL description in the referenced repo and integrate it into the sourmash repository, ensuring paths and dependencies are correct.
Tech stack
python
Domain
bioinformatics
Issue type
Feature
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
2
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
1-3 hours
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Fresh
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Clear
Prerequisites
Git
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
75