sourmash-bio/sourmash

Extend benchmarks

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#128 opened on Jan 26, 2017

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asvhelp wanted

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Description

ASV benchmarks only cover the _minhash extension, we should benchmarks other parts of the code too.

We can use https://github.com/dib-lab/sourmash/pull/71#issue-198217149 as a reference for signature loading benchmarks.

Contributor guide

Research direction
Examine the reference PR #71 for signature loading benchmarks and implement similar benchmarks for other modules in sourmash, focusing on signature loading and other key operations.
Tech stack
python
Domain
backend
Issue type
Test
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
2
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
1-3 hours
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Active
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Clear
Prerequisites
GitPython
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
75