nf-core/deepvariant

Centralized configs

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#23 opened on Oct 28, 2019

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feature-requestgood first issue

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Description

Please add support for centralized configs soon:

https://github.com/nf-core/configs

Contributor guide

Research direction
Investigate how nf core/configs works and how other pipelines integrate centralized configs. Look at the nf core pipeline template and existing pipelines for examples of adding a configs profile.
Tech stack
groovy
Domain
datadevops
Issue type
Feature
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
3
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
Half day
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Fresh
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Mostly clear
Prerequisites
GitNextflow
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
45