SciML/Catalyst.jl

add option to generate propensity functions for CLE models

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#986 opened on Jul 15, 2024

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good first issue

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Description

Currently I believe we generate CLE models using ODE ratelaws, but in some cases one might actually want to use the underlying propensity functions. We should both document this more clearly and add an option to use propensity functions instead.

Contributor guide

Research direction
Investigate how CLE models are currently generated using ODE ratelaws, then add an option to use propensity functions instead, including documentation updates.
Tech stack
julia
Domain
backend
Issue type
Feature
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
2
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
1-3 hours
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Fresh
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Clear
Prerequisites
JuliaGit
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
75